Abstract
The Raman and infrared spectra of solid methyl-5-amino-4-cyano-3- (methylthio)-1H-pyrazole-1-carbodithioate (MAMPC, C 7H 8N 4S 3) were measured in the spectral range of 3700-100 cm -1 and 4000-200 cm -1 with a resolution of 4 and 0.5 cm -1, respectively. Room temperature 13C NMR and 1H NMR spectra from room temperature down to -60 °C were also recorded. As a result of internal rotation around C-N and/or C-S bonds, eighteen rotational isomers are suggested for the MAMPC molecule (Cs symmetry). DFT/B3LYP and MP2 calculations were carried out up to 6-311++G(d,p) basis sets to include polarization and diffusion functions. The results favor conformer 1 in the solid (experimentally) and gaseous (theoretically) phases. For conformer 1, the two -CH 3 groups are directed towards the nitrogen atoms (pyrazole ring) and CS, while the -NH 2 group retains sp 2 hybridization and C-CN bond is quasi linear. To support NMR spectral assignments, chemical shifts (δ) were predicted at the B3LYP/6-311+G(2d,p) level using the method of Gauge-Invariant Atomic Orbital (GIAO) method. Moreover, the solvent effect was included via the Polarizable Continuum Model (PCM). Additionally, both infrared and Raman spectra were predicted using B3LYP/6-31G(d) calculations. The recorded vibrational, 1H and 13C NMR spectral data favors conformer 1 in both the solid phase and in solution. Aided by normal coordinate analysis and potential energy distributions, confident vibrational assignments for observed bands have been proposed. Moreover, the CH 3 barriers to internal rotations were investigated. The results are discussed herein are compared with similar molecules whenever appropriate.
| Original language | English |
|---|---|
| Pages (from-to) | 1722-1730 |
| Number of pages | 9 |
| Journal | Spectrochimica Acta - Part A: Molecular and Biomolecular Spectroscopy |
| Volume | 79 |
| Issue number | 5 |
| DOIs | |
| Publication status | Published - Sep 2011 |
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Keywords
- DFT calculations
- Infrared
- NMR spectra
- Raman
- Vibrational assignments
ASJC Scopus subject areas
- Instrumentation
- Atomic and Molecular Physics, and Optics
- Analytical Chemistry
- Spectroscopy
Cite this
Vibrational assignments, normal coordinate analysis, B3LYP calculations and conformational analysis of methyl-5-amino-4-cyano-3-(methylthio)-1H-pyrazole-1- carbodithioate. / Mohamed, Tarek A.; Hassan, Ali M.; Soliman, Usama A.; Zoghaib, Wajdi M.; Husband, John; Hassan, Saber M.
In: Spectrochimica Acta - Part A: Molecular and Biomolecular Spectroscopy, Vol. 79, No. 5, 09.2011, p. 1722-1730.Research output: Contribution to journal › Article
}
TY - JOUR
T1 - Vibrational assignments, normal coordinate analysis, B3LYP calculations and conformational analysis of methyl-5-amino-4-cyano-3-(methylthio)-1H-pyrazole-1- carbodithioate
AU - Mohamed, Tarek A.
AU - Hassan, Ali M.
AU - Soliman, Usama A.
AU - Zoghaib, Wajdi M.
AU - Husband, John
AU - Hassan, Saber M.
PY - 2011/9
Y1 - 2011/9
N2 - The Raman and infrared spectra of solid methyl-5-amino-4-cyano-3- (methylthio)-1H-pyrazole-1-carbodithioate (MAMPC, C 7H 8N 4S 3) were measured in the spectral range of 3700-100 cm -1 and 4000-200 cm -1 with a resolution of 4 and 0.5 cm -1, respectively. Room temperature 13C NMR and 1H NMR spectra from room temperature down to -60 °C were also recorded. As a result of internal rotation around C-N and/or C-S bonds, eighteen rotational isomers are suggested for the MAMPC molecule (Cs symmetry). DFT/B3LYP and MP2 calculations were carried out up to 6-311++G(d,p) basis sets to include polarization and diffusion functions. The results favor conformer 1 in the solid (experimentally) and gaseous (theoretically) phases. For conformer 1, the two -CH 3 groups are directed towards the nitrogen atoms (pyrazole ring) and CS, while the -NH 2 group retains sp 2 hybridization and C-CN bond is quasi linear. To support NMR spectral assignments, chemical shifts (δ) were predicted at the B3LYP/6-311+G(2d,p) level using the method of Gauge-Invariant Atomic Orbital (GIAO) method. Moreover, the solvent effect was included via the Polarizable Continuum Model (PCM). Additionally, both infrared and Raman spectra were predicted using B3LYP/6-31G(d) calculations. The recorded vibrational, 1H and 13C NMR spectral data favors conformer 1 in both the solid phase and in solution. Aided by normal coordinate analysis and potential energy distributions, confident vibrational assignments for observed bands have been proposed. Moreover, the CH 3 barriers to internal rotations were investigated. The results are discussed herein are compared with similar molecules whenever appropriate.
AB - The Raman and infrared spectra of solid methyl-5-amino-4-cyano-3- (methylthio)-1H-pyrazole-1-carbodithioate (MAMPC, C 7H 8N 4S 3) were measured in the spectral range of 3700-100 cm -1 and 4000-200 cm -1 with a resolution of 4 and 0.5 cm -1, respectively. Room temperature 13C NMR and 1H NMR spectra from room temperature down to -60 °C were also recorded. As a result of internal rotation around C-N and/or C-S bonds, eighteen rotational isomers are suggested for the MAMPC molecule (Cs symmetry). DFT/B3LYP and MP2 calculations were carried out up to 6-311++G(d,p) basis sets to include polarization and diffusion functions. The results favor conformer 1 in the solid (experimentally) and gaseous (theoretically) phases. For conformer 1, the two -CH 3 groups are directed towards the nitrogen atoms (pyrazole ring) and CS, while the -NH 2 group retains sp 2 hybridization and C-CN bond is quasi linear. To support NMR spectral assignments, chemical shifts (δ) were predicted at the B3LYP/6-311+G(2d,p) level using the method of Gauge-Invariant Atomic Orbital (GIAO) method. Moreover, the solvent effect was included via the Polarizable Continuum Model (PCM). Additionally, both infrared and Raman spectra were predicted using B3LYP/6-31G(d) calculations. The recorded vibrational, 1H and 13C NMR spectral data favors conformer 1 in both the solid phase and in solution. Aided by normal coordinate analysis and potential energy distributions, confident vibrational assignments for observed bands have been proposed. Moreover, the CH 3 barriers to internal rotations were investigated. The results are discussed herein are compared with similar molecules whenever appropriate.
KW - DFT calculations
KW - Infrared
KW - NMR spectra
KW - Raman
KW - Vibrational assignments
UR - http://www.scopus.com/inward/record.url?scp=79960273098&partnerID=8YFLogxK
UR - http://www.scopus.com/inward/citedby.url?scp=79960273098&partnerID=8YFLogxK
U2 - 10.1016/j.saa.2011.05.044
DO - 10.1016/j.saa.2011.05.044
M3 - Article
C2 - 21676648
AN - SCOPUS:79960273098
VL - 79
SP - 1722
EP - 1730
JO - Spectrochimica Acta - Part A: Molecular and Biomolecular Spectroscopy
JF - Spectrochimica Acta - Part A: Molecular and Biomolecular Spectroscopy
SN - 1386-1425
IS - 5
ER -