Maternal genetic diversity and phylogeography of native Arabian goats

Nasser Ali Al-Araimi, Raed Mahmoud Al-Atiyat, Osman Mahgoub Gaafar, Raquel Vasconcelos, Agusto Luzuriaga-Neira, Mohamed Osman Eisa, Nadir Amir, Mohammed Hocine Benaissa, Abdulbari Abbas Alfaris, Riyadh Saleh Aljumaah, Sayed M. Elnakhla, Mohamed M.I. Salem, Ibrahim A. Ishag, Mohammed El Khasmi, Albano Beja-Pereira

Research output: Contribution to journalArticle

2 Citations (Scopus)

Abstract

The ability to adapt to harsh environments and thrive with minimal food and water input, places goats among the most popular livestock species in Arab countries. However, little is known about the historical and contemporary genetics of most Arabian goat breeds and populations. In this study, we genetically analyzed 617 individuals (126 from this study and 491 from published sources) representing 18 Arabian goat populations by evaluating variation in the mitochondrial DNA control region (D-loop). Our data were also combined and compared with those from 339 Asian, African, European and Canarian populations. We found 186 different polymorphic sites, which allowed us to identify 453 different haplotypes belonging to three maternal haplogroups: A, B and G. Haplogroup A is the most represented among Arabian goats and highly widespread among Arab countries, whereas B group is rare. Haplogroup G is the second most frequent haplogroup and also the most diverse among Arabian goats. Measurements of nucleotide and haplotype diversity and the mean number of pairwise differences in the 18 populations yielded values of 0.025, 0.998 and 10.586, respectively. These results show that the diversity of native Arabian goat populations is high and similar to that of populations at the center of origin. Based on estimated population structures, comparison of pairwise FST and AMOVA values between Arabian populations indicated low genetic differentiation. In addition, median-joining network analysis results provide very little evidence of a previous connection between Arabian goats and regions of historical Arab influence were once installed (Iberian Peninsula and Southern Europe). Finally, the same thin evidence was also found between extant Arabian and Canarian goats, which might have partially originated due to commercial trade or during the migratory movements of ancient humans.

Original languageEnglish
Pages (from-to)88-94
Number of pages7
JournalLivestock Science
Volume206
DOIs
Publication statusPublished - Dec 1 2017

Fingerprint

Phylogeography
phylogeography
Goats
goats
Mothers
genetic variation
Arab countries
Population
Middle East
haplotypes
Haplotypes
Arabs
center of origin
goat breeds
Southern European region
Iberian Peninsula
Livestock
Mitochondrial DNA
population structure
mitochondrial DNA

Keywords

  • Arabian Peninsula
  • Capra hircus
  • Conservation
  • Genetic diversity
  • Haplogroup G
  • Native goat population

ASJC Scopus subject areas

  • Animal Science and Zoology
  • veterinary(all)

Cite this

Al-Araimi, N. A., Al-Atiyat, R. M., Gaafar, O. M., Vasconcelos, R., Luzuriaga-Neira, A., Eisa, M. O., ... Beja-Pereira, A. (2017). Maternal genetic diversity and phylogeography of native Arabian goats. Livestock Science, 206, 88-94. https://doi.org/10.1016/j.livsci.2017.09.017

Maternal genetic diversity and phylogeography of native Arabian goats. / Al-Araimi, Nasser Ali; Al-Atiyat, Raed Mahmoud; Gaafar, Osman Mahgoub; Vasconcelos, Raquel; Luzuriaga-Neira, Agusto; Eisa, Mohamed Osman; Amir, Nadir; Benaissa, Mohammed Hocine; Alfaris, Abdulbari Abbas; Aljumaah, Riyadh Saleh; Elnakhla, Sayed M.; Salem, Mohamed M.I.; Ishag, Ibrahim A.; El Khasmi, Mohammed; Beja-Pereira, Albano.

In: Livestock Science, Vol. 206, 01.12.2017, p. 88-94.

Research output: Contribution to journalArticle

Al-Araimi, NA, Al-Atiyat, RM, Gaafar, OM, Vasconcelos, R, Luzuriaga-Neira, A, Eisa, MO, Amir, N, Benaissa, MH, Alfaris, AA, Aljumaah, RS, Elnakhla, SM, Salem, MMI, Ishag, IA, El Khasmi, M & Beja-Pereira, A 2017, 'Maternal genetic diversity and phylogeography of native Arabian goats', Livestock Science, vol. 206, pp. 88-94. https://doi.org/10.1016/j.livsci.2017.09.017
Al-Araimi NA, Al-Atiyat RM, Gaafar OM, Vasconcelos R, Luzuriaga-Neira A, Eisa MO et al. Maternal genetic diversity and phylogeography of native Arabian goats. Livestock Science. 2017 Dec 1;206:88-94. https://doi.org/10.1016/j.livsci.2017.09.017
Al-Araimi, Nasser Ali ; Al-Atiyat, Raed Mahmoud ; Gaafar, Osman Mahgoub ; Vasconcelos, Raquel ; Luzuriaga-Neira, Agusto ; Eisa, Mohamed Osman ; Amir, Nadir ; Benaissa, Mohammed Hocine ; Alfaris, Abdulbari Abbas ; Aljumaah, Riyadh Saleh ; Elnakhla, Sayed M. ; Salem, Mohamed M.I. ; Ishag, Ibrahim A. ; El Khasmi, Mohammed ; Beja-Pereira, Albano. / Maternal genetic diversity and phylogeography of native Arabian goats. In: Livestock Science. 2017 ; Vol. 206. pp. 88-94.
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