Genomic characterization and population structure of a badnavirus infecting blackberry

Muhammad Shafiq Shahid, Nina Aboughanem-Sabanadzovic, Sead Sabanadzovic, Ioannis E. Tzanetakis

Research output: Contribution to journalArticle

2 Citations (Scopus)

Abstract

Blackberry viruses are pervasive, decreasing growth, yield, and plant longevity. In a quest to identify viruses associated with blackberry yellow vein, a disease caused by virus complexes, a new double-stranded DNA virus, referred to as blackberry virus F (BVF), a putative member of the genus Badnavirus, family Caulimoviridae, was identified. The virus was found in both cultivated and wild blackberry samples collected from several states in the southern United States. Population structure, host range, and association with disease symptoms were assessed. As BVF integrates into the plant genome, it affects the production of virus-free propagation material, the cornerstone for certification programs.

Original languageEnglish
Pages (from-to)110-115
Number of pages6
JournalPlant Disease
Volume101
Issue number1
DOIs
Publication statusPublished - Jan 1 2017

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Badnavirus
blackberries
population structure
genomics
viruses
Caulimoviridae
dsDNA viruses
propagation materials
plant veins
certification
Southeastern United States
host range
signs and symptoms (plants)
genome

ASJC Scopus subject areas

  • Agronomy and Crop Science
  • Plant Science

Cite this

Genomic characterization and population structure of a badnavirus infecting blackberry. / Shahid, Muhammad Shafiq; Aboughanem-Sabanadzovic, Nina; Sabanadzovic, Sead; Tzanetakis, Ioannis E.

In: Plant Disease, Vol. 101, No. 1, 01.01.2017, p. 110-115.

Research output: Contribution to journalArticle

Shahid, MS, Aboughanem-Sabanadzovic, N, Sabanadzovic, S & Tzanetakis, IE 2017, 'Genomic characterization and population structure of a badnavirus infecting blackberry', Plant Disease, vol. 101, no. 1, pp. 110-115. https://doi.org/10.1094/PDIS-04-16-0527-RE
Shahid, Muhammad Shafiq ; Aboughanem-Sabanadzovic, Nina ; Sabanadzovic, Sead ; Tzanetakis, Ioannis E. / Genomic characterization and population structure of a badnavirus infecting blackberry. In: Plant Disease. 2017 ; Vol. 101, No. 1. pp. 110-115.
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